| DAVID C BUTTERFIELD AND ALFONSO D RUBIO | New York | — | $95.6M | 0 |
| The Conference Board Inc | New York | S400 Community Improvement & Capacity Building | $95.5M | 16 |
| TOURO UNIVERSITY | New York | — | $95.3M | 19 |
| Riverdale Country School Inc | Bronx | B200 Education | $94.8M | 13 |
| UTICA UNIVERSITY | Utica | B420 Education | $94.5M | 8 |
| HUMAN RIGHTS WATCH INC | New York | Q700 International, Foreign Affairs & National Security | $94.2M | 21 |
| THE HABE FOUNDATION | New York | T22 Philanthropy, Voluntarism & Grantmaking Foundations | $94.1M | 0 |
| VISITING NURSE SERVICE OF NEW YORK HOSPICE | New York | P74 Human Services | $94M | 10 |
| PHELPS MEDICAL SERVICES PC | Sleepy Hollow | E30 Health Care | $93.8M | 6 |
| NATIONAL SEPTEMBER 11 MEMORIAL AND | New York | A84 Arts, Culture & Humanities | $93.3M | 13 |
| Westchester Health Medical PC | Westbury | E20 Health Care | $93.2M | 12 |
| DAEMEN UNIVERSITY | Amherst | B420 Education | $93.1M | 15 |
| UNITE HERE | New York | — | $93.1M | 22 |
| RPCI ONCOLOGY PC | Buffalo | E21 Health Care | $92.9M | 11 |
| NEW YORK GENOME CENTER INC | New York | E22 Health Care | $92.9M | 14 |
| THE CHILD CENTER OF NY INC | Forest Hills | — | $92.8M | 7 |
| MEDICAL DEBT RESOLUTION INC | Long Island City | P50 Human Services | $92.6M | 10 |
| BIRCH FAMILY SERVICES INC | New York | P200 Human Services | $92.3M | 9 |
| AMERICAN NATIONAL STANDARDS INSTITUTE | New York | W99 Public & Societal Benefit | $92.1M | 14 |
| THE ANIMAL MEDICAL CENTER | New York | D400 Animal-Related | $91.9M | 10 |
| REFUAH HEALTH CENTER INC | Spring Valley | E320 Health Care | $91.7M | 7 |
| CENTER FOR URBAN COMMUNITY SERVICES | New York | S200 Community Improvement & Capacity Building | $91.2M | 10 |
| ASSOCIATION FOR COMPUTING | New York | U030 Science & Technology | $91.1M | 8 |
| COMMUNITY HEALTHCARE NETWORK | New York | E320 Health Care | $90.8M | 13 |
| CONSUMER DIRECTED CHOICES INC | Albany | P82 Human Services | $90.5M | 7 |
| THE CARNEGIE HALL CORPORATION | New York | A610 Arts, Culture & Humanities | $90.5M | 15 |
| BROOKLYN LAW SCHOOL | Brooklyn | B500 Education | $90.4M | 16 |
| JEWISH CHILD CARE ASSOCIATION | Brooklyn | P200 Human Services | $90.3M | 8 |
| NEW YORK EHEALTH COLLABORATIVE INC | Albany | E05 Health Care | $90.3M | 10 |
| ASSOCIATION OF THE GRADUATES OF THE | West Point | W030 Public & Societal Benefit | $89.5M | 11 |
| CARTHAGE AREA HOSPITAL | Carthage | E22Z Health Care | $89.2M | 12 |
| NEW HORIZON COUNSELING CENTER INC | Ozone Park | — | $88.7M | 19 |
| LIFEPLAN NY INC | Utica | P20 Human Services | $88.6M | 11 |
| The J Baker Foundation Inc | New York | T22 Philanthropy, Voluntarism & Grantmaking Foundations | $88.4M | 0 |
| COVENANT HOUSE | New York | P300 Human Services | $88.3M | 10 |
| SOLOMON R GUGGENHEIM FOUNDATION | New York | A510 Arts, Culture & Humanities | $88.2M | 12 |
| AMERICAN JEWISH COMMITTEE | New York | R200 Civil Rights, Social Action & Advocacy | $88.1M | 13 |
| Metal Trades Branch Local 638 Welfare Fund | Long Island City | — | $87.7M | 9 |
| URBAN RESOURCE INSTITUTE | New York | P200 Human Services | $87.4M | 8 |
| CATHOLIC CHARITIES COMMUNITY SERVICES | New York | — | $87.4M | 8 |
| PHIPPS HOUSES | New York | — | $87.4M | 10 |
| JEWISH HOME LIFECARE MANHATTAN | New York | E910 Health Care | $87.3M | 8 |
| BIG EAST CONFERENCE INC | New York | T20 Philanthropy, Voluntarism & Grantmaking Foundations | $87.2M | 8 |
| Independent Group Home Living Program Inc | Manorville | P730 Human Services | $86.4M | 11 |
| SPRINGBROOK NY INC | Oneonta | P73Z Human Services | $86.3M | 3 |
| The H & F Baker Foundation Inc | New York | T20 Philanthropy, Voluntarism & Grantmaking Foundations | $86.2M | 0 |
| ELIZABETHTOWN COMMUNITY HOSPITAL | Elizabethtown | E22Z Health Care | $86M | 13 |
| RUTLAND NURSING HOME INC | Brooklyn | E91Z Health Care | $86M | 14 |
| JEFF-LEWIS ET AL SCH EMP HC PLAN | Clayton | — | $85.9M | 0 |
| PLANNED PARENTHOOD OF GREATER NEW YORK | New York | E420 Health Care | $85.6M | 10 |
